| base | The R Base Package |
| BiocGenerics | Generic functions for Bioconductor |
| BiocInstaller | Install/Update Bioconductor and CRAN Packages |
| bitops | Bitwise Operations |
| bnlearn | Bayesian network structure learning, parameter learning and
inference |
| boot | Bootstrap Functions (originally by Angelo Canty for S) |
| class | Functions for Classification |
| cluster | Cluster Analysis Extended Rousseeuw et al. |
| codetools | Code Analysis Tools for R |
| colorspace | Color Space Manipulation |
| compiler | The R Compiler Package |
| datasets | The R Datasets Package |
| devtools | Tools to make developing R code easier |
| dichromat | Color Schemes for Dichromats |
| digest | Create cryptographic hash digests of R objects |
| evaluate | Parsing and evaluation tools that provide more details than the
default. |
| foreign | Read Data Stored by Minitab, S, SAS, SPSS, Stata, Systat, dBase,
... |
| ggplot2 | An implementation of the Grammar of Graphics |
| graph | graph: A package to handle graph data structures |
| graphics | The R Graphics Package |
| grDevices | The R Graphics Devices and Support for Colours and Fonts |
| grid | The Grid Graphics Package |
| gridExtra | functions in Grid graphics |
| gtable | Arrange grobs in tables. |
| hasseDiagram | Drawing Hasse diagram |
| hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly From
Convex Shapes |
| httr | Tools for working with URLs and HTTP |
| igraph | Network analysis and visualization |
| kappalab | Non-additive measure and integral manipulation functions |
| kernlab | Kernel-based Machine Learning Lab |
| KernSmooth | Functions for kernel smoothing for Wand & Jones (1995) |
| labeling | Axis Labeling |
| lattice | Lattice Graphics |
| lpSolve | Interface to Lp_solve v. 5.5 to solve linear/integer programs |
| lpSolveAPI | R Interface for lp_solve version 5.5.2.0 |
| MASS | Support Functions and Datasets for Venables and Ripley's MASS |
| Matrix | Sparse and Dense Matrix Classes and Methods |
| memoise | Memoise functions |
| methods | Formal Methods and Classes |
| mgcv | Mixed GAM Computation Vehicle with GCV/AIC/REML smoothness
estimation |
| munsell | Munsell colour system |
| nlme | Linear and Nonlinear Mixed Effects Models |
| nnet | Feed-forward Neural Networks and Multinomial Log-Linear Models |
| parallel | Support for Parallel computation in R |
| plyr | Tools for splitting, applying and combining data |
| ppls | Penalized Partial Least Squares |
| proto | Prototype object-based programming |
| quadprog | Functions to solve Quadratic Programming Problems. |
| rcdd | rcdd (Computational Geometry) |
| RColorBrewer | ColorBrewer palettes |
| Rcpp | Seamless R and C++ Integration |
| RcppArmadillo | Rcpp integration for Armadillo templated linear algebra library |
| RcppEigen | Rcpp integration for the Eigen templated linear algebra library. |
| RCurl | General network (HTTP/FTP/...) client interface for R |
| registry | Registry infrastructure |
| reshape2 | Flexibly reshape data: a reboot of the reshape package. |
| Rglpk | R/GNU Linear Programming Kit Interface |
| Rgraphviz | Provides plotting capabilities for R graph objects |
| rJava | Low-level R to Java interface |
| ROI | R Optimization Infrastructure |
| ROI.plugin.glpk | ROI-plugin GLPK |
| rorranking | Ror ranking extension |
| rorutadis | Robust Ordinal Regression UTADIS |
| rpart | Recursive Partitioning |
| RXMCDA | An XMCDA parser for R |
| scales | Scale functions for graphics. |
| slam | Sparse Lightweight Arrays and Matrices |
| spatial | Functions for Kriging and Point Pattern Analysis |
| splines | Regression Spline Functions and Classes |
| stats | The R Stats Package |
| stats4 | Statistical Functions using S4 Classes |
| stringr | Make it easier to work with strings. |
| survival | Survival Analysis |
| tcltk | Tcl/Tk Interface |
| testthat | Testthat code. Tools to make testing fun :) |
| tools | Tools for Package Development |
| utils | The R Utils Package |
| whisker | {{mustache}} for R, logicless templating |
| XML | Tools for parsing and generating XML within R and S-Plus. |